Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpsf4lE9Q2N0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Gm22189-201ENSMUST00000103822 86 ntBASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Gm44719-201ENSMUST00000206404 149 ntBASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpsf4lE9Q2N0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpsf4lE9Q2N0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms