Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Gm15483-201ENSMUST00000120338 456 ntBASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Gm9727-201ENSMUST00000161387 555 ntBASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Gm8584-201ENSMUST00000171982 758 ntBASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Gm11127A7VMS2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.23□□□□□ -0.45
Gm11127A7VMS2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Gm9182-201ENSMUST00000217829 639 ntBASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Gm11127A7VMS2 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Gm45098-201ENSMUST00000207179 657 ntBASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.22□□□□□ -0.45
Gm11127A7VMS2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm11127A7VMS2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms