Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.52■□□□□ 0.23
Cfap99A0A140LIX9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cfap99A0A140LIX9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
Cfap99A0A140LIX9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Gm4984-201ENSMUST00000115987 360 ntBASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cfap99A0A140LIX9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cfap99A0A140LIX9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Gm8584-201ENSMUST00000171982 758 ntBASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 AY702102-202ENSMUST00000194651 1173 ntBASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cfap99A0A140LIX9 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms