Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Gm12260-201ENSMUST00000122447 411 ntBASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv29A0A0G2LB96 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv29A0A0G2LB96 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Trbv29A0A0G2LB96 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv29A0A0G2LB96 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv29A0A0G2LB96 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv29A0A0G2LB96 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv29A0A0G2LB96 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trbv29A0A0G2LB96 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.46□□□□□ -0.58
Trbv29A0A0G2LB96 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.46□□□□□ -0.58
Trbv29A0A0G2LB96 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv29A0A0G2LB96 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Gm37714-201ENSMUST00000194742 342 ntBASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Mir125a-201ENSMUST00000083545 68 ntBASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.45□□□□□ -0.58
Trbv29A0A0G2LB96 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trbv29A0A0G2LB96 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms