Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
PdfS4R2K0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.61□□□□□ -0.71
PdfS4R2K0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Gm14042-201ENSMUST00000120139 833 ntBASIC10.61□□□□□ -0.71
PdfS4R2K0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.61□□□□□ -0.71
PdfS4R2K0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.61□□□□□ -0.71
PdfS4R2K0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
PdfS4R2K0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Gm45167-201ENSMUST00000208007 322 ntBASIC10.61□□□□□ -0.71
PdfS4R2K0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.61□□□□□ -0.71
PdfS4R2K0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
PdfS4R2K0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PdfS4R2K0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.6□□□□□ -0.71
PdfS4R2K0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.6□□□□□ -0.71
PdfS4R2K0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
PdfS4R2K0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
PdfS4R2K0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.6□□□□□ -0.71
PdfS4R2K0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.6□□□□□ -0.71
PdfS4R2K0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC10.6□□□□□ -0.71
PdfS4R2K0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.6□□□□□ -0.71
PdfS4R2K0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
PdfS4R2K0 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.6□□□□□ -0.71
PdfS4R2K0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.6□□□□□ -0.71
PdfS4R2K0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Mir3113-201ENSMUST00000175478 76 ntBASIC10.6□□□□□ -0.71
PdfS4R2K0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
PdfS4R2K0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
PdfS4R2K0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.6□□□□□ -0.71
PdfS4R2K0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.6□□□□□ -0.71
PdfS4R2K0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.6□□□□□ -0.71
PdfS4R2K0 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.6□□□□□ -0.71
PdfS4R2K0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
PdfS4R2K0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PdfS4R2K0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PdfS4R2K0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PdfS4R2K0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.59□□□□□ -0.71
PdfS4R2K0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms