Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn9Q9Z0S7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn9Q9Z0S7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Cldn9Q9Z0S7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn9Q9Z0S7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn9Q9Z0S7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn9Q9Z0S7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn9Q9Z0S7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn9Q9Z0S7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn9Q9Z0S7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cldn9Q9Z0S7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn9Q9Z0S7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Cldn9Q9Z0S7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn9Q9Z0S7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Mir497b-201ENSMUST00000093601 125 ntBASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Acot6-202ENSMUST00000222921 3622 ntBASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn9Q9Z0S7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Gm15393-201ENSMUST00000120499 219 ntBASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Gm27618-201ENSMUST00000183671 60 ntBASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Cldn9Q9Z0S7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms