Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Mir6956-201ENSMUST00000183598 62 ntBASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Gm46209-201ENSMUST00000217912 553 ntBASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClcnkaQ9WUB7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClcnkaQ9WUB7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms