Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Gm14042-201ENSMUST00000120139 833 ntBASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Gm18889-201ENSMUST00000174284 929 ntBASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.98□□□□□ -0.33
Trim39Q9ESN2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim39Q9ESN2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Gm2810-201ENSMUST00000118681 990 ntBASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Gm13365-201ENSMUST00000121188 973 ntBASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim39Q9ESN2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.96□□□□□ -0.33
Trim39Q9ESN2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Gm21156-201ENSMUST00000189693 869 ntBASIC12.96□□□□□ -0.33
Trim39Q9ESN2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim39Q9ESN2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms