Protein–RNA interactions for Protein: Q9DCC3

Ccdc107, Coiled-coil domain-containing protein 107, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc107Q9DCC3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc107Q9DCC3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Ccdc107Q9DCC3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc107Q9DCC3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc107Q9DCC3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc107Q9DCC3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc107Q9DCC3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc107Q9DCC3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc107Q9DCC3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc107Q9DCC3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc107Q9DCC3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc107Q9DCC3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc107Q9DCC3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc107Q9DCC3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc107Q9DCC3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc107Q9DCC3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc107Q9DCC3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc107Q9DCC3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc107Q9DCC3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc107Q9DCC3 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms