Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Gm15321-201ENSMUST00000121290 288 ntBASIC12.87□□□□□ -0.35
Cdc40Q9DC48 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Gm24694-201ENSMUST00000180054 110 ntBASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Gm27663-201ENSMUST00000184839 110 ntBASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Gm43703-201ENSMUST00000200523 763 ntBASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 BC001981-202ENSMUST00000191393 1545 ntBASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cdc40Q9DC48 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Gm12859-201ENSMUST00000117834 427 ntBASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Gm9229-201ENSMUST00000222777 126 ntBASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdc40Q9DC48 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Gm7653-201ENSMUST00000214567 508 ntBASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdc40Q9DC48 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms