Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Stag1Q9D3E6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Gm38671-201ENSMUST00000200573 130 ntBASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Gm24447-201ENSMUST00000083977 338 ntBASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Gm6091-201ENSMUST00000098307 165 ntBASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Stag1Q9D3E6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Gm13226-201ENSMUST00000117838 404 ntBASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Gm13612-201ENSMUST00000119276 390 ntBASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Mir1938-201ENSMUST00000158746 100 ntBASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Stag1Q9D3E6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Gm12742-201ENSMUST00000117326 410 ntBASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Gm42550-201ENSMUST00000201553 960 ntBASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Stag1Q9D3E6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.41■□□□□ 0.22
Stag1Q9D3E6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms