Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim13Q9CYB0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim13Q9CYB0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim13Q9CYB0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim13Q9CYB0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim13Q9CYB0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim13Q9CYB0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim13Q9CYB0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim13Q9CYB0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Gm15483-201ENSMUST00000120338 456 ntBASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim13Q9CYB0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Gm1401-201ENSMUST00000122048 772 ntBASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Gm6443-201ENSMUST00000203599 874 ntBASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim13Q9CYB0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim13Q9CYB0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms