Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Raf1Q99N57 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Raf1Q99N57 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Raf1Q99N57 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Raf1Q99N57 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Raf1Q99N57 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Raf1Q99N57 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Raf1Q99N57 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.46□□□□□ -0.42
Raf1Q99N57 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Raf1Q99N57 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Raf1Q99N57 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.45□□□□□ -0.42
Raf1Q99N57 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
Raf1Q99N57 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Raf1Q99N57 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.45□□□□□ -0.42
Raf1Q99N57 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Raf1Q99N57 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.45□□□□□ -0.42
Raf1Q99N57 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Raf1Q99N57 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.45□□□□□ -0.42
Raf1Q99N57 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.45□□□□□ -0.42
Raf1Q99N57 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.45□□□□□ -0.42
Raf1Q99N57 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.45□□□□□ -0.42
Raf1Q99N57 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.45□□□□□ -0.42
Raf1Q99N57 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Raf1Q99N57 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Raf1Q99N57 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Raf1Q99N57 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Raf1Q99N57 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Raf1Q99N57 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.44□□□□□ -0.42
Raf1Q99N57 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.44□□□□□ -0.42
Raf1Q99N57 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Gm5479-201ENSMUST00000160578 435 ntBASIC12.44□□□□□ -0.42
Raf1Q99N57 Gm24158-201ENSMUST00000175263 71 ntBASIC12.44□□□□□ -0.42
Raf1Q99N57 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.44□□□□□ -0.42
Raf1Q99N57 Mir6977-201ENSMUST00000184960 64 ntBASIC12.44□□□□□ -0.42
Raf1Q99N57 Gm10253-201ENSMUST00000194270 940 ntBASIC12.44□□□□□ -0.42
Raf1Q99N57 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.44□□□□□ -0.42
Raf1Q99N57 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.44□□□□□ -0.42
Raf1Q99N57 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.44□□□□□ -0.42
Raf1Q99N57 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Raf1Q99N57 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Raf1Q99N57 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Raf1Q99N57 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Raf1Q99N57 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Raf1Q99N57 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Raf1Q99N57 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Raf1Q99N57 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms