Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.05□□□□□ -0.32
Nkd1Q99MH6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.05□□□□□ -0.32
Nkd1Q99MH6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkd1Q99MH6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkd1Q99MH6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkd1Q99MH6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.05□□□□□ -0.32
Nkd1Q99MH6 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkd1Q99MH6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkd1Q99MH6 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.05□□□□□ -0.32
Nkd1Q99MH6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Nkd1Q99MH6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkd1Q99MH6 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Gm13823-201ENSMUST00000119930 345 ntBASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.03□□□□□ -0.32
Nkd1Q99MH6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Nkd1Q99MH6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Nkd1Q99MH6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nkd1Q99MH6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkd1Q99MH6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkd1Q99MH6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkd1Q99MH6 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.02□□□□□ -0.32
Nkd1Q99MH6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Gm5264-201ENSMUST00000190584 848 ntBASIC13.02□□□□□ -0.33
Nkd1Q99MH6 AA619741-201ENSMUST00000195095 646 ntBASIC13.02□□□□□ -0.33
Nkd1Q99MH6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkd1Q99MH6 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms