Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx6-1Q99MA9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 BC037039-201ENSMUST00000192003 2205 ntBASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Gm15808-201ENSMUST00000119046 604 ntBASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Mir497b-201ENSMUST00000093601 125 ntBASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx6-1Q99MA9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Gm42627-201ENSMUST00000197347 224 ntBASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Nkx6-1Q99MA9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx6-1Q99MA9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms