Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm15770-201ENSMUST00000117498 584 ntBASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm13369-201ENSMUST00000119442 987 ntBASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm12403-201ENSMUST00000121384 959 ntBASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm44364-201ENSMUST00000198368 141 ntBASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.51□□□□□ -0.09
Clp1Q99LI9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clp1Q99LI9 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.51□□□□□ -0.09
Clp1Q99LI9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Gm7029-201ENSMUST00000173226 450 ntBASIC14.5□□□□□ -0.09
Clp1Q99LI9 Gm25927-201ENSMUST00000175058 117 ntBASIC14.5□□□□□ -0.09
Clp1Q99LI9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Olfr284-202ENSMUST00000206647 966 ntBASIC14.5□□□□□ -0.09
Clp1Q99LI9 Gm18935-201ENSMUST00000212692 664 ntBASIC14.5□□□□□ -0.09
Clp1Q99LI9 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC14.5□□□□□ -0.09
Clp1Q99LI9 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.5□□□□□ -0.09
Clp1Q99LI9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.5□□□□□ -0.09
Clp1Q99LI9 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.5□□□□□ -0.09
Clp1Q99LI9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Clp1Q99LI9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.5□□□□□ -0.09
Clp1Q99LI9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Clp1Q99LI9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.49□□□□□ -0.09
Clp1Q99LI9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Gm25261-201ENSMUST00000157416 134 ntBASIC14.49□□□□□ -0.09
Clp1Q99LI9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.49□□□□□ -0.09
Clp1Q99LI9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Clp1Q99LI9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Clp1Q99LI9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms