Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.98■□□□□ 0.31
RtcbQ99LF4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.98■□□□□ 0.31
RtcbQ99LF4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.97■□□□□ 0.31
RtcbQ99LF4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RtcbQ99LF4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Gm8227-201ENSMUST00000223306 571 ntBASIC16.97■□□□□ 0.31
RtcbQ99LF4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Mir433-201ENSMUST00000093564 124 ntBASIC16.97■□□□□ 0.31
RtcbQ99LF4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RtcbQ99LF4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Gm2991-201ENSMUST00000173338 480 ntBASIC16.96■□□□□ 0.31
RtcbQ99LF4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Mir5132-201ENSMUST00000175166 71 ntBASIC16.96■□□□□ 0.31
RtcbQ99LF4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.96■□□□□ 0.31
RtcbQ99LF4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.96■□□□□ 0.31
RtcbQ99LF4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RtcbQ99LF4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RtcbQ99LF4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RtcbQ99LF4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.95■□□□□ 0.3
RtcbQ99LF4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Gm24255-201ENSMUST00000104481 128 ntBASIC16.95■□□□□ 0.3
RtcbQ99LF4 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.95■□□□□ 0.3
RtcbQ99LF4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.95■□□□□ 0.3
RtcbQ99LF4 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.95■□□□□ 0.3
RtcbQ99LF4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms