Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Mir698-201ENSMUST00000102164 109 ntBASIC15.88■□□□□ 0.13
Rfc4Q99J62 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Rfc4Q99J62 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.88■□□□□ 0.13
Rfc4Q99J62 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rfc4Q99J62 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.87■□□□□ 0.13
Rfc4Q99J62 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.87■□□□□ 0.13
Rfc4Q99J62 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Gm6152-201ENSMUST00000151704 340 ntBASIC15.87■□□□□ 0.13
Rfc4Q99J62 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Gm29741-201ENSMUST00000192667 421 ntBASIC15.87■□□□□ 0.13
Rfc4Q99J62 Gm18054-201ENSMUST00000207539 555 ntBASIC15.87■□□□□ 0.13
Rfc4Q99J62 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.87■□□□□ 0.13
Rfc4Q99J62 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rfc4Q99J62 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
Rfc4Q99J62 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Gm8810-201ENSMUST00000172895 754 ntBASIC15.86■□□□□ 0.13
Rfc4Q99J62 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Gm45880-201ENSMUST00000213041 853 ntBASIC15.86■□□□□ 0.13
Rfc4Q99J62 Gm8598-201ENSMUST00000221184 836 ntBASIC15.86■□□□□ 0.13
Rfc4Q99J62 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.86■□□□□ 0.13
Rfc4Q99J62 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rfc4Q99J62 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfc4Q99J62 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.86■□□□□ 0.13
Rfc4Q99J62 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfc4Q99J62 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.85■□□□□ 0.13
Rfc4Q99J62 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfc4Q99J62 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.85■□□□□ 0.13
Rfc4Q99J62 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms