Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Gm12428-201ENSMUST00000119844 727 ntBASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Gm13616-201ENSMUST00000120600 222 ntBASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha8Q91Y12 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Grk6-205ENSMUST00000224653 2976 ntBASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Mir1897-201ENSMUST00000122581 272 ntBASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Gm6916-202ENSMUST00000205523 195 ntBASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Shd-206ENSMUST00000225145 998 ntBASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdha8Q91Y12 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.48□□□□□ -0.25
Pcdha8Q91Y12 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms