Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Gm9824-201ENSMUST00000178707 561 ntBASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Gm44608-201ENSMUST00000206827 855 ntBASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb4Q91XZ6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Gm14822-201ENSMUST00000122247 291 ntBASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 AA619741-201ENSMUST00000195095 646 ntBASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Gm43474-201ENSMUST00000196415 774 ntBASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb4Q91XZ6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Gm27631-201ENSMUST00000184163 466 ntBASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb4Q91XZ6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms