Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb6Q91XZ4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb6Q91XZ4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb6Q91XZ4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms