Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhga4Q91XY4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Gm27437-201ENSMUST00000183429 107 ntBASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Gm7063-201ENSMUST00000186840 981 ntBASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga4Q91XY4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms