Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Gm5687-201ENSMUST00000118252 640 ntBASIC15.78■□□□□ 0.12
Trex1Q91XB0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Gm45331-201ENSMUST00000209868 554 ntBASIC15.78■□□□□ 0.12
Trex1Q91XB0 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.78■□□□□ 0.12
Trex1Q91XB0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trex1Q91XB0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 Gm16177-201ENSMUST00000120728 718 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 Gm12403-201ENSMUST00000121384 959 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 Gm12134-201ENSMUST00000122109 520 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Trex1Q91XB0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 Itm2b-204ENSMUST00000228637 783 ntBASIC15.77■□□□□ 0.12
Trex1Q91XB0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trex1Q91XB0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trex1Q91XB0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.77■□□□□ 0.11
Trex1Q91XB0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trex1Q91XB0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trex1Q91XB0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Trex1Q91XB0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trex1Q91XB0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trex1Q91XB0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trex1Q91XB0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trex1Q91XB0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trex1Q91XB0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trex1Q91XB0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trex1Q91XB0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Gm23931-201ENSMUST00000103842 109 ntBASIC15.76■□□□□ 0.11
Trex1Q91XB0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Gm10156-201ENSMUST00000122364 462 ntBASIC15.76■□□□□ 0.11
Trex1Q91XB0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.76■□□□□ 0.11
Trex1Q91XB0 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.76■□□□□ 0.11
Trex1Q91XB0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trex1Q91XB0 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.76■□□□□ 0.11
Trex1Q91XB0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms