Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usb1Q91W78 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usb1Q91W78 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.7□□□□□ -0.22
Usb1Q91W78 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usb1Q91W78 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usb1Q91W78 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usb1Q91W78 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usb1Q91W78 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usb1Q91W78 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usb1Q91W78 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usb1Q91W78 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usb1Q91W78 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Usb1Q91W78 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.69□□□□□ -0.22
Usb1Q91W78 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.69□□□□□ -0.22
Usb1Q91W78 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Usb1Q91W78 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Gm3436-201ENSMUST00000179930 840 ntBASIC13.69□□□□□ -0.22
Usb1Q91W78 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.69□□□□□ -0.22
Usb1Q91W78 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.69□□□□□ -0.22
Usb1Q91W78 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.69□□□□□ -0.22
Usb1Q91W78 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Usb1Q91W78 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.69□□□□□ -0.22
Usb1Q91W78 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Usb1Q91W78 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.69□□□□□ -0.22
Usb1Q91W78 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.69□□□□□ -0.22
Usb1Q91W78 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.69□□□□□ -0.22
Usb1Q91W78 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.69□□□□□ -0.22
Usb1Q91W78 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Usb1Q91W78 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Usb1Q91W78 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Usb1Q91W78 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.68□□□□□ -0.22
Usb1Q91W78 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.68□□□□□ -0.22
Usb1Q91W78 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Usb1Q91W78 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Usb1Q91W78 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Usb1Q91W78 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.68□□□□□ -0.22
Usb1Q91W78 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.68□□□□□ -0.22
Usb1Q91W78 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.68□□□□□ -0.22
Usb1Q91W78 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Usb1Q91W78 Gm5866-201ENSMUST00000177881 973 ntBASIC13.68□□□□□ -0.22
Usb1Q91W78 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.68□□□□□ -0.22
Usb1Q91W78 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.68□□□□□ -0.22
Usb1Q91W78 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Gm46209-201ENSMUST00000217912 553 ntBASIC13.68□□□□□ -0.22
Usb1Q91W78 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.68□□□□□ -0.22
Usb1Q91W78 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.68□□□□□ -0.22
Usb1Q91W78 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.68□□□□□ -0.22
Usb1Q91W78 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Usb1Q91W78 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Usb1Q91W78 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.68□□□□□ -0.22
Usb1Q91W78 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.68□□□□□ -0.22
Usb1Q91W78 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.68□□□□□ -0.22
Usb1Q91W78 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Usb1Q91W78 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.68□□□□□ -0.22
Usb1Q91W78 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Usb1Q91W78 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms