Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Speer6-ps1-203ENSMUST00000223482 979 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.66□□□□□ -0.06
Pcdhb17Q91VD8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Gm12591-201ENSMUST00000122407 1177 ntBASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Gm3436-201ENSMUST00000179930 840 ntBASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Gm8480-201ENSMUST00000190350 698 ntBASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Gm43761-201ENSMUST00000202132 991 ntBASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Gm6562-201ENSMUST00000221903 464 ntBASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 AC154515.3-201ENSMUST00000225081 1159 ntBASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb17Q91VD8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb17Q91VD8 Gm28649-201ENSMUST00000189153 1581 ntBASIC14.64□□□□□ -0.07
Pcdhb17Q91VD8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb17Q91VD8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb17Q91VD8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb17Q91VD8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb17Q91VD8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb17Q91VD8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb17Q91VD8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb17Q91VD8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb17Q91VD8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb17Q91VD8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb17Q91VD8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb17Q91VD8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhb17Q91VD8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms