Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Gm37935-201ENSMUST00000192012 982 ntBASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Gm16476-201ENSMUST00000221544 139 ntBASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
H1fooQ8VIK3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Gm26308-201ENSMUST00000157768 69 ntBASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Gm2445-201ENSMUST00000182798 989 ntBASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Gm37714-201ENSMUST00000194742 342 ntBASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Gm6916-202ENSMUST00000205523 195 ntBASIC11.59□□□□□ -0.55
H1fooQ8VIK3 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
H1fooQ8VIK3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
H1fooQ8VIK3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
H1fooQ8VIK3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Gm29741-201ENSMUST00000192667 421 ntBASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Gm43575-201ENSMUST00000196420 516 ntBASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.58□□□□□ -0.56
H1fooQ8VIK3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms