Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.7□□□□□ -0.06
TraipQ8VIG6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.7□□□□□ -0.06
TraipQ8VIG6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Gm12390-201ENSMUST00000117897 397 ntBASIC14.69□□□□□ -0.06
TraipQ8VIG6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Mir7085-201ENSMUST00000184353 66 ntBASIC14.69□□□□□ -0.06
TraipQ8VIG6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Gm7561-201ENSMUST00000211203 886 ntBASIC14.69□□□□□ -0.06
TraipQ8VIG6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.69□□□□□ -0.06
TraipQ8VIG6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
TraipQ8VIG6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TraipQ8VIG6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.68□□□□□ -0.06
TraipQ8VIG6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.68□□□□□ -0.06
TraipQ8VIG6 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Gm28196-201ENSMUST00000187719 640 ntBASIC14.68□□□□□ -0.06
TraipQ8VIG6 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.68□□□□□ -0.06
TraipQ8VIG6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.68□□□□□ -0.06
TraipQ8VIG6 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TraipQ8VIG6 AC122881.1-201ENSMUST00000225757 2695 ntBASIC14.68□□□□□ -0.06
TraipQ8VIG6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TraipQ8VIG6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.67□□□□□ -0.06
TraipQ8VIG6 AC107453.4-201ENSMUST00000227068 1817 ntBASIC14.67□□□□□ -0.06
TraipQ8VIG6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TraipQ8VIG6 Gm15770-201ENSMUST00000117498 584 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms