Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Gm16198-201ENSMUST00000118766 670 ntBASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc58Q8R3Q6 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc58Q8R3Q6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Gm24589-201ENSMUST00000116692 94 ntBASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Thap2-203ENSMUST00000218989 527 ntBASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc58Q8R3Q6 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms