Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.58■□□□□ 0.24
Col23a1Q8K4G2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col23a1Q8K4G2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col23a1Q8K4G2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col23a1Q8K4G2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col23a1Q8K4G2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col23a1Q8K4G2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col23a1Q8K4G2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col23a1Q8K4G2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Col23a1Q8K4G2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col23a1Q8K4G2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col23a1Q8K4G2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col23a1Q8K4G2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col23a1Q8K4G2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Gm23270-201ENSMUST00000104055 131 ntBASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Gm9083-201ENSMUST00000120423 819 ntBASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Gm27023-201ENSMUST00000182372 285 ntBASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col23a1Q8K4G2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Gm6447-201ENSMUST00000118905 835 ntBASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Gm15276-201ENSMUST00000145953 498 ntBASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Gm20426-201ENSMUST00000173657 440 ntBASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 AA914427-201ENSMUST00000193194 1166 ntBASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col23a1Q8K4G2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Gm7593-201ENSMUST00000187246 644 ntBASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col23a1Q8K4G2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col23a1Q8K4G2 Gm5846-201ENSMUST00000193146 1414 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms