Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Gm27397-201ENSMUST00000184997 107 ntBASIC8.7□□□□□ -1.02
Cystm1Q8K353 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Gm19817-201ENSMUST00000199764 2132 ntBASIC8.7□□□□□ -1.02
Cystm1Q8K353 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC8.7□□□□□ -1.02
Cystm1Q8K353 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Gm5366-201ENSMUST00000215494 1338 ntBASIC8.7□□□□□ -1.02
Cystm1Q8K353 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Gm28386-201ENSMUST00000189147 1849 ntBASIC8.7□□□□□ -1.02
Cystm1Q8K353 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Gm14451-201ENSMUST00000121581 1542 ntBASIC8.7□□□□□ -1.02
Cystm1Q8K353 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cystm1Q8K353 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Gm11185-201ENSMUST00000117732 1007 ntBASIC8.69□□□□□ -1.02
Cystm1Q8K353 Gm14722-201ENSMUST00000118943 689 ntBASIC8.69□□□□□ -1.02
Cystm1Q8K353 Gm27702-201ENSMUST00000184512 56 ntBASIC8.69□□□□□ -1.02
Cystm1Q8K353 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Gm9682-201ENSMUST00000197505 556 ntBASIC8.69□□□□□ -1.02
Cystm1Q8K353 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Gm38102-201ENSMUST00000192791 1935 ntBASIC8.69□□□□□ -1.02
Cystm1Q8K353 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cystm1Q8K353 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms