Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Gm20949-201ENSMUST00000206478 952 ntBASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf39Q8K2Z2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Gm14719-201ENSMUST00000121891 340 ntBASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Gm9522-201ENSMUST00000182394 926 ntBASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Gm20445-201ENSMUST00000061905 565 ntBASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf39Q8K2Z2 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.33□□□□□ -0.11
Prpf39Q8K2Z2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf39Q8K2Z2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf39Q8K2Z2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf39Q8K2Z2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf39Q8K2Z2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Prpf39Q8K2Z2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Prpf39Q8K2Z2 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.33□□□□□ -0.11
Prpf39Q8K2Z2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prpf39Q8K2Z2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prpf39Q8K2Z2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms