Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zswim3Q8CFL8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zswim3Q8CFL8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zswim3Q8CFL8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Zswim3Q8CFL8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zswim3Q8CFL8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Gm16379-201ENSMUST00000161469 348 ntBASIC15.08■□□□□ 0
Zswim3Q8CFL8 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Gm20482-202ENSMUST00000174729 825 ntBASIC15.08■□□□□ 0
Zswim3Q8CFL8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.08■□□□□ 0
Zswim3Q8CFL8 Gm8762-201ENSMUST00000193486 339 ntBASIC15.08■□□□□ 0
Zswim3Q8CFL8 Gm37922-201ENSMUST00000195596 455 ntBASIC15.08■□□□□ 0
Zswim3Q8CFL8 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.08■□□□□ 0
Zswim3Q8CFL8 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.08■□□□□ 0
Zswim3Q8CFL8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0
Zswim3Q8CFL8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.07■□□□□ 0
Zswim3Q8CFL8 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Gm15370-201ENSMUST00000117158 253 ntBASIC15.07■□□□□ 0
Zswim3Q8CFL8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Gm22902-201ENSMUST00000158488 302 ntBASIC15.07■□□□□ 0
Zswim3Q8CFL8 Gm16505-201ENSMUST00000179981 232 ntBASIC15.07■□□□□ 0
Zswim3Q8CFL8 Gm27341-201ENSMUST00000183570 106 ntBASIC15.07■□□□□ 0
Zswim3Q8CFL8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zswim3Q8CFL8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.06■□□□□ 0
Zswim3Q8CFL8 Gm13297-201ENSMUST00000120205 934 ntBASIC15.06■□□□□ 0
Zswim3Q8CFL8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.06■□□□□ 0
Zswim3Q8CFL8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.06■□□□□ 0
Zswim3Q8CFL8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Zswim3Q8CFL8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms