Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Gm11478-201ENSMUST00000117851 599 ntBASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Gm8584-201ENSMUST00000171982 758 ntBASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Gm16476-201ENSMUST00000221544 139 ntBASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Gm6180-201ENSMUST00000065243 498 ntBASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Rubie-203ENSMUST00000227803 2430 ntBASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vps53Q8CCB4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Gm12882-201ENSMUST00000121696 517 ntBASIC16.09■□□□□ 0.17
Vps53Q8CCB4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Gm18018-201ENSMUST00000198273 408 ntBASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Gm43703-201ENSMUST00000200523 763 ntBASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Gm45384-201ENSMUST00000210451 277 ntBASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Vps53Q8CCB4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vps53Q8CCB4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vps53Q8CCB4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vps53Q8CCB4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vps53Q8CCB4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.08■□□□□ 0.17
Vps53Q8CCB4 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm29310-201ENSMUST00000185468 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm21825-201ENSMUST00000185728 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm29109-201ENSMUST00000185895 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm21896-201ENSMUST00000186520 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm21873-201ENSMUST00000186728 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm21794-201ENSMUST00000187056 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm21880-201ENSMUST00000187275 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm21826-201ENSMUST00000187451 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm21198-201ENSMUST00000188393 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm21749-201ENSMUST00000189343 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm21901-201ENSMUST00000189568 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm29424-201ENSMUST00000189716 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm28599-201ENSMUST00000189838 694 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm21867-201ENSMUST00000189917 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm29269-201ENSMUST00000190087 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm21722-201ENSMUST00000190153 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm28423-201ENSMUST00000190701 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm21899-201ENSMUST00000190745 696 ntBASIC16.08■□□□□ 0.16
Vps53Q8CCB4 Gm21910-201ENSMUST00000191163 696 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms