Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rft1Q8C3B8 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Gm13464-201ENSMUST00000119418 935 ntBASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Gm18737-201ENSMUST00000173594 937 ntBASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rft1Q8C3B8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Gm15483-201ENSMUST00000120338 456 ntBASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rft1Q8C3B8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms