Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
Smim4Q8C1Q6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim4Q8C1Q6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim4Q8C1Q6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smim4Q8C1Q6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smim4Q8C1Q6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.59□□□□□ -0.55
Smim4Q8C1Q6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Smim4Q8C1Q6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Smim4Q8C1Q6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Smim4Q8C1Q6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Gm29741-201ENSMUST00000192667 421 ntBASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Mir125a-201ENSMUST00000083545 68 ntBASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smim4Q8C1Q6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Gm27631-201ENSMUST00000184163 466 ntBASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Gm18027-201ENSMUST00000218947 619 ntBASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smim4Q8C1Q6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms