Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Gm7775-201ENSMUST00000218871 853 ntBASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Gm9063-201ENSMUST00000223299 582 ntBASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Gm14767-201ENSMUST00000121559 586 ntBASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Gm27321-201ENSMUST00000185021 205 ntBASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sh3rf3Q8C120 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sh3rf3Q8C120 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sh3rf3Q8C120 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms