Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SprnQ8BWU1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.21□□□□□ -0.46
SprnQ8BWU1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.2□□□□□ -0.46
SprnQ8BWU1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.2□□□□□ -0.46
SprnQ8BWU1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SprnQ8BWU1 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.19□□□□□ -0.46
SprnQ8BWU1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Gm15427-201ENSMUST00000117288 531 ntBASIC12.19□□□□□ -0.46
SprnQ8BWU1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.19□□□□□ -0.46
SprnQ8BWU1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.19□□□□□ -0.46
SprnQ8BWU1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.19□□□□□ -0.46
SprnQ8BWU1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.19□□□□□ -0.46
SprnQ8BWU1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.19□□□□□ -0.46
SprnQ8BWU1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SprnQ8BWU1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Gm13365-201ENSMUST00000121188 973 ntBASIC12.18□□□□□ -0.46
SprnQ8BWU1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Gm27494-201ENSMUST00000184735 189 ntBASIC12.18□□□□□ -0.46
SprnQ8BWU1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SprnQ8BWU1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.18□□□□□ -0.46
SprnQ8BWU1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.18□□□□□ -0.46
SprnQ8BWU1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.18□□□□□ -0.46
SprnQ8BWU1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms