Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Gm37042-201ENSMUST00000193816 581 ntBASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Col16a1Q8BLX7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Gm24830-201ENSMUST00000102024 166 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Snord83b-201ENSMUST00000104546 94 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Gm24990-201ENSMUST00000157406 323 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Gm25890-201ENSMUST00000177643 165 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Gm22614-201ENSMUST00000178300 165 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Gm32025-201ENSMUST00000217960 307 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 CT025533.2-201ENSMUST00000228715 1248 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Gm22042-201ENSMUST00000082989 165 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Gm26232-201ENSMUST00000083360 166 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Gm24136-201ENSMUST00000083374 165 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Gm26110-201ENSMUST00000083971 165 ntBASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col16a1Q8BLX7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Gm8805-201ENSMUST00000117848 313 ntBASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Col16a1Q8BLX7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col16a1Q8BLX7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col16a1Q8BLX7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col16a1Q8BLX7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col16a1Q8BLX7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Col16a1Q8BLX7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.77■□□□□ 0.43
Col16a1Q8BLX7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms