Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh20Q8BIZ0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh20Q8BIZ0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Gm25144-201ENSMUST00000179561 110 ntBASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Gm25352-201ENSMUST00000179815 110 ntBASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Gm18766-201ENSMUST00000189811 808 ntBASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Pcdh20Q8BIZ0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh20Q8BIZ0 Mir7023-201ENSMUST00000185093 64 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms