Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Gm29127-201ENSMUST00000188304 517 ntBASIC24.3■■□□□ 1.48
Rtl1Q7M732 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rtl1Q7M732 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rtl1Q7M732 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Gm43134-201ENSMUST00000199434 1886 ntBASIC24.29■■□□□ 1.48
Rtl1Q7M732 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Gm7029-201ENSMUST00000173226 450 ntBASIC24.29■■□□□ 1.48
Rtl1Q7M732 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Gm27514-201ENSMUST00000183692 110 ntBASIC24.29■■□□□ 1.48
Rtl1Q7M732 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Gm14371-201ENSMUST00000138925 1518 ntBASIC24.29■■□□□ 1.48
Rtl1Q7M732 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtl1Q7M732 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Mmp14-206ENSMUST00000225641 3238 ntBASIC24.28■■□□□ 1.48
Rtl1Q7M732 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Rn7sk-201ENSMUST00000083103 331 ntBASIC24.28■■□□□ 1.48
Rtl1Q7M732 Gm26315-201ENSMUST00000083890 321 ntBASIC24.28■■□□□ 1.48
Rtl1Q7M732 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Gm9200-201ENSMUST00000118513 1354 ntBASIC24.28■■□□□ 1.48
Rtl1Q7M732 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtl1Q7M732 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Gm22018-201ENSMUST00000104357 131 ntBASIC24.27■■□□□ 1.48
Rtl1Q7M732 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Itm2b-204ENSMUST00000228637 783 ntBASIC24.27■■□□□ 1.48
Rtl1Q7M732 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC24.27■■□□□ 1.48
Rtl1Q7M732 AC154262.2-201ENSMUST00000224310 2293 ntBASIC24.27■■□□□ 1.48
Rtl1Q7M732 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Gm27731-201ENSMUST00000185192 107 ntBASIC24.27■■□□□ 1.48
Rtl1Q7M732 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC24.27■■□□□ 1.48
Rtl1Q7M732 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rtl1Q7M732 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC24.26■■□□□ 1.47
Rtl1Q7M732 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rtl1Q7M732 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rtl1Q7M732 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rtl1Q7M732 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Rtl1Q7M732 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rtl1Q7M732 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rtl1Q7M732 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rtl1Q7M732 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rtl1Q7M732 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
Rtl1Q7M732 Gm16202-201ENSMUST00000117532 544 ntBASIC24.26■■□□□ 1.47
Rtl1Q7M732 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rtl1Q7M732 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms