Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.31□□□□□ -0.6
Tgfbr1Q64729 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tgfbr1Q64729 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Rpph1-201ENSMUST00000175096 319 ntBASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Mzt1-203ENSMUST00000227948 952 ntBASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.3□□□□□ -0.6
Tgfbr1Q64729 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tgfbr1Q64729 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms