Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.3■□□□□ 0.04
Ift88Q61371 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ift88Q61371 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ift88Q61371 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ift88Q61371 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ift88Q61371 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.3■□□□□ 0.04
Ift88Q61371 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.3■□□□□ 0.04
Ift88Q61371 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ift88Q61371 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ift88Q61371 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ift88Q61371 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ift88Q61371 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Ift88Q61371 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ift88Q61371 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ift88Q61371 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ift88Q61371 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ift88Q61371 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ift88Q61371 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.29■□□□□ 0.04
Ift88Q61371 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.29■□□□□ 0.04
Ift88Q61371 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.29■□□□□ 0.04
Ift88Q61371 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ift88Q61371 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.29■□□□□ 0.04
Ift88Q61371 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.29■□□□□ 0.04
Ift88Q61371 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ift88Q61371 Gm18889-201ENSMUST00000174284 929 ntBASIC15.29■□□□□ 0.04
Ift88Q61371 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Gm37714-201ENSMUST00000194742 342 ntBASIC15.29■□□□□ 0.04
Ift88Q61371 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ift88Q61371 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ift88Q61371 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ift88Q61371 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ift88Q61371 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ift88Q61371 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.29■□□□□ 0.04
Ift88Q61371 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ift88Q61371 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Gm27494-201ENSMUST00000184735 189 ntBASIC15.28■□□□□ 0.04
Ift88Q61371 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.28■□□□□ 0.04
Ift88Q61371 Gm44719-201ENSMUST00000206404 149 ntBASIC15.28■□□□□ 0.04
Ift88Q61371 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.28■□□□□ 0.04
Ift88Q61371 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.28■□□□□ 0.04
Ift88Q61371 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ift88Q61371 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ift88Q61371 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ift88Q61371 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ift88Q61371 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.28■□□□□ 0.04
Ift88Q61371 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.27■□□□□ 0.04
Ift88Q61371 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ift88Q61371 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.27■□□□□ 0.04
Ift88Q61371 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.27■□□□□ 0.04
Ift88Q61371 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ift88Q61371 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ift88Q61371 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms