Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.95□□□□□ -0.18
Six4Q61321 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Six4Q61321 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.94□□□□□ -0.18
Six4Q61321 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.94□□□□□ -0.18
Six4Q61321 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Six4Q61321 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.94□□□□□ -0.18
Six4Q61321 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.94□□□□□ -0.18
Six4Q61321 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.94□□□□□ -0.18
Six4Q61321 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Six4Q61321 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.94□□□□□ -0.18
Six4Q61321 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Six4Q61321 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.94□□□□□ -0.18
Six4Q61321 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Six4Q61321 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Six4Q61321 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.93□□□□□ -0.18
Six4Q61321 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Six4Q61321 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Six4Q61321 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Six4Q61321 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.93□□□□□ -0.18
Six4Q61321 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.93□□□□□ -0.18
Six4Q61321 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.93□□□□□ -0.18
Six4Q61321 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.93□□□□□ -0.18
Six4Q61321 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.93□□□□□ -0.18
Six4Q61321 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.93□□□□□ -0.18
Six4Q61321 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.93□□□□□ -0.18
Six4Q61321 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.93□□□□□ -0.18
Six4Q61321 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.93□□□□□ -0.18
Six4Q61321 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Six4Q61321 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Six4Q61321 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Six4Q61321 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Six4Q61321 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Six4Q61321 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.92□□□□□ -0.18
Six4Q61321 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Six4Q61321 Gm5279-201ENSMUST00000199575 745 ntBASIC13.92□□□□□ -0.18
Six4Q61321 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Six4Q61321 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms