Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd4Q60688 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd4Q60688 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.41□□□□□ -0.1
Foxd4Q60688 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Foxd4Q60688 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Foxd4Q60688 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd4Q60688 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd4Q60688 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd4Q60688 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd4Q60688 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.41□□□□□ -0.1
Foxd4Q60688 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd4Q60688 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.41□□□□□ -0.1
Foxd4Q60688 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd4Q60688 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd4Q60688 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd4Q60688 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.41□□□□□ -0.1
Foxd4Q60688 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Foxd4Q60688 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.4□□□□□ -0.1
Foxd4Q60688 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Foxd4Q60688 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Foxd4Q60688 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Foxd4Q60688 Gm26474-201ENSMUST00000116762 122 ntBASIC14.4□□□□□ -0.1
Foxd4Q60688 Gm11025-201ENSMUST00000140773 466 ntBASIC14.4□□□□□ -0.1
Foxd4Q60688 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Foxd4Q60688 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.4□□□□□ -0.1
Foxd4Q60688 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.4□□□□□ -0.1
Foxd4Q60688 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC14.4□□□□□ -0.1
Foxd4Q60688 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.4□□□□□ -0.1
Foxd4Q60688 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Foxd4Q60688 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.4□□□□□ -0.1
Foxd4Q60688 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.4□□□□□ -0.1
Foxd4Q60688 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxd4Q60688 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.4□□□□□ -0.11
Foxd4Q60688 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Foxd4Q60688 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Foxd4Q60688 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.39□□□□□ -0.11
Foxd4Q60688 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Foxd4Q60688 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Foxd4Q60688 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 Gm25025-201ENSMUST00000175018 111 ntBASIC14.39□□□□□ -0.11
Foxd4Q60688 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.39□□□□□ -0.11
Foxd4Q60688 Mir6956-201ENSMUST00000183598 62 ntBASIC14.39□□□□□ -0.11
Foxd4Q60688 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Foxd4Q60688 Gm20553-201ENSMUST00000204205 844 ntBASIC14.39□□□□□ -0.11
Foxd4Q60688 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.39□□□□□ -0.11
Foxd4Q60688 Gm45098-201ENSMUST00000207179 657 ntBASIC14.39□□□□□ -0.11
Foxd4Q60688 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC14.39□□□□□ -0.11
Foxd4Q60688 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.39□□□□□ -0.11
Foxd4Q60688 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Foxd4Q60688 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Foxd4Q60688 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.39□□□□□ -0.11
Foxd4Q60688 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Foxd4Q60688 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC14.39□□□□□ -0.11
Foxd4Q60688 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxd4Q60688 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC14.38□□□□□ -0.11
Foxd4Q60688 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Foxd4Q60688 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms