Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClpbQ60649 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ClpbQ60649 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ClpbQ60649 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClpbQ60649 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClpbQ60649 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClpbQ60649 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClpbQ60649 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
ClpbQ60649 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.29□□□□□ -0.28
ClpbQ60649 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.29□□□□□ -0.28
ClpbQ60649 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.29□□□□□ -0.28
ClpbQ60649 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.29□□□□□ -0.28
ClpbQ60649 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.29□□□□□ -0.28
ClpbQ60649 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Gm27437-201ENSMUST00000183429 107 ntBASIC13.29□□□□□ -0.28
ClpbQ60649 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.29□□□□□ -0.28
ClpbQ60649 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.29□□□□□ -0.28
ClpbQ60649 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.29□□□□□ -0.28
ClpbQ60649 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ClpbQ60649 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClpbQ60649 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ClpbQ60649 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ClpbQ60649 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.28□□□□□ -0.28
ClpbQ60649 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.28□□□□□ -0.28
ClpbQ60649 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.28□□□□□ -0.28
ClpbQ60649 Gm5866-201ENSMUST00000177881 973 ntBASIC13.28□□□□□ -0.28
ClpbQ60649 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.28□□□□□ -0.28
ClpbQ60649 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.28□□□□□ -0.28
ClpbQ60649 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.28□□□□□ -0.28
ClpbQ60649 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.28□□□□□ -0.28
ClpbQ60649 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.28□□□□□ -0.28
ClpbQ60649 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.28□□□□□ -0.28
ClpbQ60649 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.28□□□□□ -0.28
ClpbQ60649 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.28□□□□□ -0.28
ClpbQ60649 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ClpbQ60649 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.28□□□□□ -0.28
ClpbQ60649 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
ClpbQ60649 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClpbQ60649 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClpbQ60649 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClpbQ60649 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
ClpbQ60649 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ClpbQ60649 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClpbQ60649 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClpbQ60649 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
ClpbQ60649 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ClpbQ60649 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.27□□□□□ -0.29
ClpbQ60649 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Gm14719-201ENSMUST00000121891 340 ntBASIC13.27□□□□□ -0.29
ClpbQ60649 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.27□□□□□ -0.29
ClpbQ60649 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.27□□□□□ -0.29
ClpbQ60649 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.27□□□□□ -0.29
ClpbQ60649 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.27□□□□□ -0.29
ClpbQ60649 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ClpbQ60649 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ClpbQ60649 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms