Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nr1h4Q60641 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.17□□□□□ -0.3
Nr1h4Q60641 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Gm9727-201ENSMUST00000161387 555 ntBASIC13.17□□□□□ -0.3
Nr1h4Q60641 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nr1h4Q60641 AA619741-201ENSMUST00000195095 646 ntBASIC13.17□□□□□ -0.3
Nr1h4Q60641 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.17□□□□□ -0.3
Nr1h4Q60641 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.17□□□□□ -0.3
Nr1h4Q60641 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nr1h4Q60641 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Gm2810-201ENSMUST00000118681 990 ntBASIC13.16□□□□□ -0.3
Nr1h4Q60641 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Gm25927-201ENSMUST00000175058 117 ntBASIC13.16□□□□□ -0.3
Nr1h4Q60641 Gm44719-201ENSMUST00000206404 149 ntBASIC13.16□□□□□ -0.3
Nr1h4Q60641 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.16□□□□□ -0.3
Nr1h4Q60641 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.16□□□□□ -0.3
Nr1h4Q60641 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.16□□□□□ -0.3
Nr1h4Q60641 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.16□□□□□ -0.3
Nr1h4Q60641 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nr1h4Q60641 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.15□□□□□ -0.3
Nr1h4Q60641 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nr1h4Q60641 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms