Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Gm26464-201ENSMUST00000157094 305 ntBASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Gm9794-201ENSMUST00000202370 423 ntBASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.57■□□□□ 0.24
Vps54Q5SPW0 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.57■□□□□ 0.24
Vps54Q5SPW0 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps54Q5SPW0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Gm11524-201ENSMUST00000119349 807 ntBASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Gm12490-201ENSMUST00000120255 560 ntBASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Gm27772-201ENSMUST00000184900 187 ntBASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.56■□□□□ 0.24
Vps54Q5SPW0 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.56■□□□□ 0.24
Vps54Q5SPW0 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps54Q5SPW0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Gm11424-201ENSMUST00000121929 829 ntBASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Mir7654-201ENSMUST00000185082 70 ntBASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Gm8515-201ENSMUST00000194852 576 ntBASIC16.55■□□□□ 0.24
Vps54Q5SPW0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps54Q5SPW0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps54Q5SPW0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms