Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spire1Q52KF3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spire1Q52KF3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spire1Q52KF3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spire1Q52KF3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spire1Q52KF3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spire1Q52KF3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spire1Q52KF3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spire1Q52KF3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.04□□□□□ -0.16
Spire1Q52KF3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Gm42693-201ENSMUST00000196779 631 ntBASIC14.04□□□□□ -0.16
Spire1Q52KF3 Gm45331-201ENSMUST00000209868 554 ntBASIC14.04□□□□□ -0.16
Spire1Q52KF3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.04□□□□□ -0.16
Spire1Q52KF3 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.04□□□□□ -0.16
Spire1Q52KF3 Gm8598-201ENSMUST00000221184 836 ntBASIC14.04□□□□□ -0.16
Spire1Q52KF3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Spire1Q52KF3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Proscos-202ENSMUST00000178990 666 ntBASIC14.03□□□□□ -0.16
Spire1Q52KF3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.03□□□□□ -0.16
Spire1Q52KF3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spire1Q52KF3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Spire1Q52KF3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spire1Q52KF3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Spire1Q52KF3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Spire1Q52KF3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spire1Q52KF3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spire1Q52KF3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spire1Q52KF3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spire1Q52KF3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spire1Q52KF3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spire1Q52KF3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spire1Q52KF3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spire1Q52KF3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spire1Q52KF3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spire1Q52KF3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Spire1Q52KF3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spire1Q52KF3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.02□□□□□ -0.17
Spire1Q52KF3 Gm16177-201ENSMUST00000120728 718 ntBASIC14.02□□□□□ -0.17
Spire1Q52KF3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spire1Q52KF3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spire1Q52KF3 Gm8810-201ENSMUST00000172895 754 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms