Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ckap2Q3V1H1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ckap2Q3V1H1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ckap2Q3V1H1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Ckap2Q3V1H1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ckap2Q3V1H1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.83■□□□□ 0.13
Ckap2Q3V1H1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ckap2Q3V1H1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Gm44855-201ENSMUST00000205725 362 ntBASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ckap2Q3V1H1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Gm5354-201ENSMUST00000182417 973 ntBASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Mir6977-201ENSMUST00000184960 64 ntBASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Gm19078-201ENSMUST00000206311 727 ntBASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Gm6218-201ENSMUST00000219812 628 ntBASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Gm24447-201ENSMUST00000083977 338 ntBASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ckap2Q3V1H1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Gm15770-201ENSMUST00000117498 584 ntBASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Gm26464-201ENSMUST00000157094 305 ntBASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Gm43094-201ENSMUST00000196549 921 ntBASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ckap2Q3V1H1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms