Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cul4aQ3TCH7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cul4aQ3TCH7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cul4aQ3TCH7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cul4aQ3TCH7 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.53□□□□□ -0.08
Cul4aQ3TCH7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cul4aQ3TCH7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cul4aQ3TCH7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.53□□□□□ -0.08
Cul4aQ3TCH7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cul4aQ3TCH7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cul4aQ3TCH7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cul4aQ3TCH7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cul4aQ3TCH7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Cul4aQ3TCH7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Gm8000-201ENSMUST00000188378 592 ntBASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
Cul4aQ3TCH7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Gm43474-201ENSMUST00000196415 774 ntBASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cul4aQ3TCH7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms